{ "_id": "6a1edcfab401979e7340ff0c", "Package": "ImmuneSigR", "Title": "Immune Cell Signature Retrieval and Single-Cell Scoring", "Version": "0.1.0", "Authors@R": "c(\nperson(\"Yingyan\", \"Liang\", , \"liangyingyan0625@163.com\", role = c(\"aut\", \"cre\")),\nperson(\"Peng\", \"Luo\", email = \"luopeng@smu.edu.cn\", role = \"aut\")\n)", "Description": "Provides a literature-derived database of immune cell\nmarkers formatted as Gene Matrix Transposed (GMT) files. Users\ncan search immune cell signatures, retrieve marker lists,\nexport GMT files, create custom marker sets, and score\ngene-by-cell expression matrices with dependency-free\nrank-based or mean-expression methods. Cell subpopulations are\ndistinguished by their source PMIDs. For the core curation of\nthe lung cell atlas, see Travaglini et al. (2020)\n. For the pan-cancer B cell\nsignatures, see Fitzsimons et al. 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